Harvard University
Appointed in 2011
Bacterial biofilm regulation by D-amino acids
University of California, Berkeley /
Stanford University
Appointed in 1979
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University of California, Berkeley / Stanford University
Appointed in 1979
Electrical properties of niological membranes
Boston Children's Hospital, Harvard Medical School
Appointed in 2025
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Boston Children's Hospital, Harvard Medical School
Appointed in 2025
Uncovering oligodendrocyte lineage dynamics in the human brain using somatic mutations
Human brain development is challenging to study for many reasons. Dr. Emre Caglayan’s project as an HHMI-JCC Fellow aims to overcome experimental limitations related to studying brain development and provide unprecedented insight into how a brain develops over the human lifespan.
As a Ph.D. student in Dr. Genevieve Konopka’s lab at UT Southwestern Medical Center, Caglayan investigated human brain evolution. Using advanced genomics technologies, he found that human brains have unique functionalities used for the development and maturation of specialized cells relative to other closely related species.
Dr. Caglayan notes that the absence of non-invasive molecular tools has prevented further exploration of the human brain, and was captivated by the approach of Christopher Walsh’s lab to use somatic mutations as a “barcode” to trace cell lineages. This approach will enable Caglayan’s investigation into brain dynamics so that they can investigate how new mature oligodendrocytes are generated throughout a human lifespan. This research will provide fundamental insight into neurodevelopment and may reveal novel clues about how these processes go awry during neurodegeneration.
University of Oregon, Eugene
Appointed in 2019
Defining mechanisms of heat-sensitive synaptonemal complex in spermatocytes
Sexually reproducing organisms faithfully transmit their genome to the next generation by forming haploid gametes, such as eggs and sperm. In contrast to oogenesis and other developmental processes, spermatogenesis is sensitive to small temperature changes, requiring a narrow isotherm of 2-7ºC below basal body temperature. Although failure to precisely thermoregulate spermatogenesis or exposure to elevated temperatures are strongly linked to both male infertility and an increased risk of testicular cancer, the mechanisms behind temperature-induced damage on male reproductive health remain unknown. Recent studies indicate that the composition and/or function of chromosome structures differ during oogenesis and spermatogenesis, which may contribute to the temperature-sensitivity of spermatogenesis. In Caenorhabditis elegans, we have found using structured illumination microscopy that the synaptonemal complex (SC), a meiosis specific structure central to the proper execution of key meiotic processes, is destabilized specifically in spermatocytes and not oocytes following heat-stress. My ongoing studies seek to understand the differences in SC organization and composition that render it temperature sensitive only in spermatogenesis. Overall, these studies will illuminate how temperature specifically affects genome integrity in developing sperm and identify the mechanisms that underlie temperature-associated infertility and cancer risk of the male germline.
Baylor College of Medicine
Appointed in 1997
Genome-wide monitoring of genetic changes in cancer development
University of California, San Francisco /
Yale University
Appointed in 2008
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University of California, San Francisco / Yale University
Appointed in 2008
Actin cytoskeleton reorganization during tubulogenesis
Current Research: The role of actin cytoskeleton remodeling during epithelial morphogenesis.
Prior to coming to the United States in 2003, I received bachelor’s degree in science from Fudan University in Shanghai, China. My undergraduate thesis topic was characterization of bacteriophage T3 DNA ligase.¬î My graduate study was done under Dr. James E. Bear in the Department of Cell and Developmental Biology at the University of North Carolina, Chapel Hill. My dissertation title was “Coronin 1B coordinates actin dynamics in lamellipodia.¬î ¬†Currently, I am working with Dr. Keith Mostov in the Department of Anatomy at UCSF. ¬†I really enjoy the life of doing research, and am looking forward to continuing my scientific journey. In my free time, I like to hike and ski.”
Memorial Sloan Kettering Cancer Center
Appointed in 2025
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Memorial Sloan Kettering Cancer Center
Appointed in 2025
Recording cell states and signaling events to reveal cell fate decisions during pancreatic islet differentiation
Gene transcription, the process of copying DNA into RNA for gene expression, is a complicated process that relies on sequences of DNA known as enhancers to help regulate the process. Enhancers are non-coding stretches of DNA that regulate the expression of a subset of genes.
Dr. Brendan Camellato made crucial insights into enhancer-mediated regulation during his thesis research in Dr. Jef Boeke’s lab at NYU Langone Health. In one of his projects, Camellato investigated transcriptional regulation across various species. In addition to being an impressive technical advance, this approach provided insight into a plausible mechanism for how genetic information is transferred and regulated in yeast and mouse embryonic stem cells.
Now, as a Fellow in Junhong Choi, Ph.D.’s lab at Memorial Sloan Kettering Cancer Center, Dr. Camellato will use enhancers as a tool to record cellular histories during normal development, and in diseased states. Using the recently developed ENhancer-based Genomic Recording of transcriptional Activity in Multiplex (ENGRAM), Camellato will investigate how cell signaling drives stem cell differentiation with single-cell resolution. His research promises to advance these important technologies, as well as provide unprecedented insight into human development.
Stanford University
Appointed in 1977
Chromosomal organization
Chemisches Institut der Universitat, Switzerland
Appointed in 1951
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Chemisches Institut der Universitat, Switzerland
Appointed in 1951
Carcinogenesis
University of Oregon
Appointed in 2003
The mechanism of cytokinesis
Harvard University
Appointed in 2026
Molecular mechanisms underlying ancient cross-kingdom interactions and terrestrial life
Matthew Capek, Ph.D. believes that by examining how organisms sense and respond to their closest neighbors we can deepen our understanding of basic biology while also gaining insight into human health, disease, and ecosystem stability. During his graduate research he uncovered the distinct ways through which flies sense and adapt to environmental temperatures. Now, as a Jane Coffin Childs Fellow, Capek will investigate the adaptation and cooperation between some of the first plant and animal pioneers to transition from living in the waters to living on land.
As a graduate student in Marco Gallio, Ph.D.’s lab at Northwestern University, Capek showed how responses to temperature evolved in fly species hailing from different environments, from temperate forests to hot deserts. Flies from mild climates avoid heat and have molecular differences in their receptors that directly sense temperature. Mojave Desert flies are instead attracted to heat, and this shift in behavior arises from a change in how the brain processes and interprets the signal. He also studied the cold-adapted fly Chionea alexandriana, showing that they generate heat in response to rapid cold challenges, carry molecular changes in pathways to cope with stress, and produce antifreeze proteins that prevent freezing in sub-zero temperatures.
For his fellowship in Nicholas Bellono’s lab at Harvard University, Capek will focus on understanding how interactions between mosses and springtails established the first terrestrial ecosystems. In water, moss sperm can swim to eggs to achieve fertilization, but life on land makes that journey far more difficult. Springtails help mosses reproduce on land by carrying sperm between moss sex organs. Capek will examine how mosses compel springtails to facilitate their reproduction, and determine what benefit motivates the springtails’ efforts. He predicts that understanding this ancient plant-animal cooperation will yield a new framework for understanding how molecular communication drives the evolution of complex life.
Rockefeller University
Appointed in 2012
Metabolic connections to pluripotent chromatin
King's College, London
Appointed in 1968
Viral and bacterial DNA
Massachusetts Institute of Technology
Appointed in 1978
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Massachusetts Institute of Technology
Appointed in 1978
Regulation of sucrose utilization in yeast
Swiss Institute of Experimental Cancer Research, Switzerland
Appointed in 1975
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Swiss Institute of Experimental Cancer Research, Switzerland
Appointed in 1975
Affinity chromatography
University of Utah
Appointed in 2025
Evolution of receptor-ligand selectivity to evade bacterial ligand mimicry
Dr. Lews Caro is fascinated with the molecular arms race that occurs between a host and pathogen and how it shapes their evolution. Caro hypothesizes “that by understanding the molecular mechanisms of evolutionary phenomena, we can actually gain more insight into the evolutionary process itself.”
Caro’s graduate research in Michael Ailion’s lab at the University of Washington uncovered the mechanism of a toxin-antidote system in C. elegans. While such systems are widespread in bacteria and fungi, relatively few examples have been discovered in animals, and those few examples remain poorly characterized.
As a Fellow in Nels Elde’s lab at the University of Utah, Dr. Caro will explore the relationship between a special type of transmembrane protein, called ligand receptors, and the ligand itself. Pathogens secrete toxic ligand imitators which bind to host receptors and hijack normal host signaling. This exerts an evolutionary pressure on the receptor to escape activation by pathogen toxic ligands while retaining responsiveness to host ligands. Caro will use a combination of evolutionary analyses, functional and binding assays, and structural biology approaches to determine how receptors resolve this evolutionary conflict.
University of California, Berkeley
Appointed in 2006
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University of California, Berkeley
Appointed in 2006
Controlling metabolic pathways with RNA aptamers
University of California, Santa Barbara
Appointed in 1983
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University of California, Santa Barbara
Appointed in 1983
Yeast centromere structure and function
Beatson Institute for Cancer Research, Scotland
Appointed in 1970
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Beatson Institute for Cancer Research, Scotland
Appointed in 1970
DNA template activity
Harvard University Medical School
Appointed in 2020
Zinc finger TFs in activity-dependent human neuronal gene regulation
University of California, San Francisco
Appointed in 2003
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University of California, San Francisco
Appointed in 2003
California Institute of Technology
Appointed in 1958
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California Institute of Technology
Appointed in 1958
Chemical structure of RNA from tobacco mosaic virus
Harvard University Medical School
Appointed in 2005
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Harvard University Medical School
Appointed in 2005
Molecular mechanisms to degrade abnoraml proteins
Stanford University School of Medicine
Appointed in 2006
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Stanford University School of Medicine
Appointed in 2006
Investigation of asymmetric RNA localization
University of California, San Francisco
Appointed in 2017
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University of California, San Francisco
Appointed in 2017
Novel effectors of oncogenic KRAS that regulate cell signaling
Stanford University School of Medicine
Appointed in 2013
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Stanford University School of Medicine
Appointed in 2013
Effects of irradiation injury on systemic-neurogenic communication as targets for limiting cognitive dysfunction
During my Ph.D. studies at Washington University, I worked with David Holtzman to show that ApoE e4 may increase Alzheimer’s disease risk by impairing Ab clearance from the brain, thus shifting the onset of its accumulation. My interest in neurodegeneration and aging motivated me to understand factors that regulate aging and brain health in unconventional ways. My project as a Jane Coffin Childs fellow in Tony Wyss-Coray’s laboratory has been to elucidate a novel systemic-neurogenic communication mechanism that appears to be disrupted in the context of brain irradiation therapy. Specifically, I am investigating the role of immune signaling molecules in mediating the neurogenic and cognitive dysfunction observed in the post-irradiation syndrome in pediatric brain cancer patients. Additionally, I am actively pursuing whether related blood-borne signaling molecules in young plasma may be sufficient to ameliorate age-related decreases in cognition and synaptic plasticity. To examine these complex mechanisms, I am leveraging various physiological methods, including plasma transfer and parabiosis.
Yale University /
University of California, Berkeley
Appointed in 1974
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Yale University / University of California, Berkeley
Appointed in 1974
Release of secretory proteins
University of California, San Francisco
Appointed in 2021
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University of California, San Francisco
Appointed in 2021
Biophysical dissection of implantation defects resulting from maternal aging
Infertility represents a significant societal burden, as nearly 60% of human pregnancies fail before the embryo implants into the uterus. These miscarriages become more prevalent as women age above 35 years. But implantation remains a black box within development because it occurs within the mother’s body, so progress revealing its physical mechanisms is lagging. Early in preimplantation sages, primitive placental lineages must be specified for faithful implantation. Driving these lineage commitments are subcellular mechanical forces that transduce expression of downstream fate determinants for specification and ultimate invasion of placental tissues. However, in mammalian embryos of aged mothers, embryos display poor developmental health with decreased placental structures owing to impaired implantation. We hypothesize that these pathologies may stem from either early defects in tissue specification or later mechanical uterine invasion, both of which could give rise to age-related spontaneous abortions. This proposal therefore seeks to understand how the early cell biological and biophysical mechanisms are altered in the embryo with advanced maternal age, and how these mechanisms can be tuned to rejuvenate “aged” embryos to rescue developmental potential. Working in embryos of aged mice, we will combine approaches from cell and developmental biology, biophysics, and synthetic biology to ask: (1) Does maternal aging decouple the embryo’s upstream mechanics from downstream signal transduction during placental fate acquisition? (2) Is the logic of signal transduction for placental fate determinants altered via maternal aging? and (3) Do these age-related mechanisms together promote defective mechanical invasion during uterine implantation? Bridging these disparate scientific spheres will be critical in understanding infertility and improving female reproductive longevity.
University of California, Los Angeles
Appointed in 2003
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University of California, Los Angeles
Appointed in 2003
Genetic screen for regulators of neural connectivity
Harvard University
Appointed in 1975
Massachusetts Institute of Technology
Appointed in 1982
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Massachusetts Institute of Technology
Appointed in 1982
Developmental neurobiology
Duke University
Appointed in 1992
Chlamydomonas genes in chloroplast DNA repair
University of California, Berkeley
Appointed in 2001
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University of California, Berkeley
Appointed in 2001
Harvard University
Appointed in 2006
Multicellularity in Bacillus subtilis
Salk Institute for Biological Studies
Appointed in 1994
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Salk Institute for Biological Studies
Appointed in 1994
Identification of putative retinoic acid cistrans isomerase
Universite de Paris, France
Appointed in 1971
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Universite de Paris, France
Appointed in 1971
Regulation of cellular differentiation in B. subtilis
Massachusetts Institute of Technology
Appointed in 1982
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Massachusetts Institute of Technology
Appointed in 1982
Genetic control of cell lineage in c. elegans
Whitehead Institute for Biomedical Research
Appointed in 1996
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Whitehead Institute for Biomedical Research
Appointed in 1996
Structural basis of membrane fusion in HIV infection
Insitut for Biochemie, Max-Planck-Institut
Appointed in 1959
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Insitut for Biochemie, Max-Planck-Institut
Appointed in 1959
Syntesis of steroids
University of Washington, Seattle
Appointed in 1974
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University of Washington, Seattle
Appointed in 1974
Harvard University
Appointed in 2021
The evolution of complex chemosensation
How animal brains evolved the capacity for sophisticated computation is not well understood. One major facet of this problem is the evolution of chemosensation. Chemosensation is the primary sense of most animals, and involves complex neural computations. We do not know how this sense evolved, or how most animals – which are aquatic invertebrates – perform chemosensation. I am studying chemosensation in an acoel worm, an aquatic invertebrate that by virtue of its phylogenetic position as the likely outgroup to all other animals with central nervous systems, retains some primitive features of early central nervous systems. Acoels nonetheless perform sophisticated behavior that requires complex chemosensory processing, but how their brains and chemosensors work is unknown. Using a combination of automated behavioral tracking, transgenics, and neural activity imaging, I aim to understand the logic of chemosensory processing in a tractable acoel worm. Through comparisons with known chemosensory mechanisms of other animals, this will shed light on how complex chemosensory systems evolved. This project will also establish experimental approaches for the future study of neural computations and behavior in acoel worms and other aquatic invertebrates.
Yale University
Appointed in 2011
Sensing gut microbiota through G-protein coupled receptors
Massachusetts Institute of Technology
Appointed in 2002
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Massachusetts Institute of Technology
Appointed in 2002
Fluorescent probes for the roles of NO in cancer
University of California, Berkeley
Appointed in 2005
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University of California, Berkeley
Appointed in 2005
Engineering E coli for production of anticancer drug
Harvard University Medical School
Appointed in 2012
Single particle flavivirus membrane fusion
Harvard University
Appointed in 1982
Structure and biology of genes in the murin S region
Carnegie Institute for Science
Appointed in 1991
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Carnegie Institute for Science
Appointed in 1991
Mechanisms of transcriptional activation by C/EPB
Whitehead Institute for Biomedical Research
Appointed in 1987
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Whitehead Institute for Biomedical Research
Appointed in 1987
Analysis of the adipocyte glucose transporter
Centre Nationale de la Recherche Scientifique, France
Appointed in 1966
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Centre Nationale de la Recherche Scientifique, France
Appointed in 1966
Biosynthetic pathway of DPA in B. subtilis
University of California, San Diego
Appointed in 2003
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University of California, San Diego
Appointed in 2003
Dissecting kinetohore function in C Elegans
Harvard University
Appointed in 2005